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Table 1 Primers used in the study

From: Application of bioinformatics-coupled experimental analysis reveals a new transport-competent nuclear localization signal in the nucleoprotein of Influenza A virus strain

S. No.

Clone

Primer No.

Sequence

Restriction sites

1

NP-FL

35104

5'-cgcgaattc atggcgaccaaaggc

EcoRI

  

35575

3'-gaccccgggccc attgtcgtactcctc

ApaI

2

obpNLS+NC

36823

5'-cgc gaattc atccaaatgtgcaccg

EcoRI

  

62638

3'-cgcgggccc tttgatcattctgat

ApaI

3

obpNLS+NTer

39815

5'-gggctcgag catccaaatgtgc

XhoI

  

39821

3'-gcggaattc gcgccagattcgtct

EcoRI

4

obpNLS+CTer

39820

5'-gggctcgag caagaaaactggagga

XhoI

  

62638

3'-cgcgggccc tttgatcattctgat

ApaI

5

bpNLS-1R

39815

5'-gggctcgag catccaaatgtgc

XhoI

  

39813

3'-gcgcccggg tcatctcctccactt

ApaI

6

bpNLS-1M

39815

5'-gggctcgag catccaaatgtgc

XhoI

  

39818

3'-gcgcccggg tcatctcatccactt

ApaI

7

bpNLS-2R

39814

5'-gcggaattc aggagagaactcatc

EcoRI

  

62638

3'-cgcgggccc tttgatcattctgat

ApaI

8

bpNLS-2M

39819

5'-gcggaattc atgagagaactcatc

EcoRI

  

62638

3'-cgcgggccc tttgatcattctgat

ApaI

9

NPΔ obpNLS

39815

5'-gggctcgag catccaaatgtgc

XhoI

  

40466

3'-gcggaattc aggatctttccc

EcoRI

  

39817

5'-gaggaattc caagctaataatggt

EcoRI

  

62638

3'-cgcgggccctttgatcattctgat

ApaI

10

NP41–89

39815

5'-gggctcgag catccaaatgtgc

XhoI

  

40466

3'-gcggaattc aggatctttccc

EcoRI

11

NP122–197

39817

5'-gaggaattc caagctaataatggt

EcoRI

  

62638

3'-cgcgggccctttgatcattctgat

ApaI

12

2bpNLS+NSP6

39820

5'-gggctcgag caagaaaactggagga

XhoI

  

39821

3'-gcggaattc gcgccagattcgtct

EcoRI