Complex name | Before simulation | After simulation | |||||
Index | SOX2 | Dist. [Å] | Human DNA | SOX2 | Dist. [Å] | Human DNA | |
Derived A-allele DNA-SOX2 | 1 | ARG43 | 3.02 | DT | ARG40 | 1.81 | DG |
2 | ARG43 | 2.95 | DG | LYS42 | 1.81 | DT | |
3 | ARG43 | 2.95 | DT | ARG43 | 1.93 | DT | |
4 | ARG43 | 3.07 | DT | ARG43 | 1.76 | DT | |
5 | ASN46 | 3.8 | DA | ARG43 | 2.03 | DG | |
6 | ALA47 | 3.68 | DA | ASN46 | 2.98 | DA | |
7 | ARG56 | 2.88 | DT | ARG56 | 1.73 | DG | |
8 | ASN68 | 2.97 | DG | ASN68 | 2.2 | DT | |
9 | LYS73 | 2.15 | DA | LYS73 | 1.83 | DC | |
10 | ARG113 | 3.01 | DT | LYS80 | 1.75 | DC | |
11 | ARG114 | 3 | DG | ARG98 | 2.11 | DT | |
12 | LYS115 | 2.26 | DA | ARG98 | 1.69 | DT | |
13 | - | - | - | ARG113 | 2.28 | DT | |
14 | - | - | - | ARG113 | 2.32 | DG | |
15 | - | - | - | ARG113 | 1.76 | DT | |
Before simulation | After simulation | ||||||
Ancestral T-allele DNA -SOX2 | Index | SOX2 | Dist. [Å] | Neanderthal DNA | SOX2 | Dist. [Å] | Neanderthal DNA |
1 | ARG43 | 3.5 | DT | ARG40 | 1.93 | DT | |
2 | ARG43 | 3.68 | DT | LYS42 | 1.9 | DG | |
3 | ARG43 | 2.97 | DA | ARG43 | 2.06 | DT | |
4 | ARG56 | 3.75 | DT | ASN68 | 1.73 | DT | |
5 | ASN68 | 3.74 | DC | LYS73 | 2.3 | DC | |
6 | ASN68 | 3 | DC | LYS73 | 1.93 | DT | |
7 | ASN68 | 2.43 | DG | LYS87 | 1.83 | DC | |
8 | - | - | - | ARG98 | 1.75 | DA | |
9 | - | - | - | ARG98 | 1.63 | DA | |
10 | - | - | - | ARG113 | 2.26 | DG | |
11 | - | - | - | ARG113 | 2.09 | DT | |
12 | - | - | - | ARG113 | 1.82 | DT |