Analysis of mitotic phosphorylation of Borealin
© Kaur et al; licensee BioMed Central Ltd. 2007
Received: 06 October 2006
Accepted: 22 January 2007
Published: 22 January 2007
The main role of the chromosomal passenger complex is to ensure that Aurora B kinase is properly localized and activated before and during mitosis. Borealin, a member of the chromosomal passenger complex, shows increased expression during G2/M phases and is involved in targeting the complex to the centromere and the spindle midzone, where it ensures proper chromosome segregation and cytokinesis. Borealin has a consensus CDK1 phosphorylation site, threonine 106 and can be phosphorylated by Aurora B Kinase at serine 165 in vitro.
Here, we show that Borealin is phosphorylated during mitosis in human cells. Dephosphorylation of Borealin occurs as cells exit mitosis. The phosphorylated form of Borealin is found in an INCENP-containing complex in mitosis. INCENP-containing complexes from cells in S phase are enriched in the phosphorylated form suggesting that phosphorylation may encourage entry of Borealin into the chromosomal passenger complex. Although Aurora B Kinase is found in complexes that contain Borealin, it is not required for the mitotic phosphorylation of Borealin. Mutation of T106 or S165 of Borealin to alanine does not alter the electrophoretic mobility shift of Borealin. Experiments with cyclohexamide and the phosphatase inhibitor sodium fluoride suggest that Borealin is phosphorylated by a protein kinase that can be active in interphase and mitosis and that the phosphorylation may be regulated by a short-lived phosphatase that is active in interphase but not mitosis.
Borealin is phosphorylated during mitosis. Neither residue S165, T106 nor phosphorylation of Borealin by Aurora B Kinase is required to generate the mitotic, shifted form of Borealin. Suppression of phosphorylation during interphase is ensured by a labile protein, possibly a cell cycle regulated phosphatase.
The chromosomal passenger complex (CPC) consisting of Aurora B kinase, INCENP (INner CENtromere Protein), Survivin and Borealin/Dasra B plays important roles during mitosis and cytokinesis . One of the main aims of the CPC proteins is to ensure that Aurora B is accessible to phosphorylate its various substrates like histone H3, CENP-A, MKLP1, MCAK, INCENP, Survivin, MgcRacGAP, Vimentin, Desmin and myosin-II [2–14] at the right time. Thus, the CPC proteins regulate multiple mitotic events like chromosome segregation, operation of the spindle assembly checkpoint and cytokinesis . How phosphorylation by Aurora B affects the functions of its various substrates and hence influences cell division is not completely understood.
The CPC proteins concentrate at the inner-centromere during metaphase, migrate to the spindle midzone during anaphase and finally to midbody during cytokinesis . The exact mechanism of this characteristic localization of the CPC is currently unknown, however clues are emerging. Borealin and Survivin can self-associate in vitro and in vivo and can also interact with each other [15–20]. Borealin can bind to DNA in vitro . Also, the BIR-domain of Survivin has been proposed to interact with the centromeres . Furthermore, a complex of Borealin, Survivin and the N-terminus of INCENP (1–58) is capable of targeting to the centromere in vivo . Borealin and Survivin may act as a scaffold to bring INCENP and Aurora B Kinase to the centromere. INCENP can bind to tubulin directly thereby targeting the CPC to the spindle midzone [22–24].
Several members of the CPC are regulated by post-translational modification. For example, INCENP is phosphorylated by Aurora B and CDK1, both of which enhance the ability of INCENP to activate Aurora B [25, 26]. Also, the phosphorylation of INCENP by CDK1 allows it to interact with Plk1 and recruit it to the centromere . There is also evidence that Survivin is regulated by phosphorylation . Borealin co-localizes with Aurora B Kinase and can be phosphorylated at serine 165 by Aurora B Kinase in vitro . Here, we show that Borealin is phosphorylated in vivo during mitosis as indicated by an electrophoretic mobility shift. Aurora B is not required for this particular modification. Mutation of S165, potential Aurora B Kinase phosphorylation site, to alanine did not alter the mitotic phosphorylation of Borealin or its localization to the centromere, spindle midzone or midbody indicating that other sites are targets of modification in vivo.
Two electrophoretic forms of Borealin in human cells
Mitotic WT-8 cells collected by mitotic shake-off in the absence of nocodazole contained mostly the slowly migrating form of Borealin, similarly to nocodazole blocked cells (Fig. 1B). This suggests that the modification of Borealin that we have identified occurs as cells naturally enter mitosis, and is not a consequence of activation of the spindle checkpoint. In addition, the mitosis-specific mobility shift of wild-type Borealin was observed in two independent stable clones that express different levels of the ectopic protein (Fig. 1C and 1D). This suggests that phosphorylation is not clone specific and can be seen when lower levels of the protein are expressed.
Analysis of endogenous Borealin
Phosphorylation of Borealin during mitosis
The majority of Borealin is dephosphorylated in asynchronously growing cells, and phosphorylated during mitosis. To determine if Borealin is dephosphorylated as cells exit mitosis we synchronized WT-8 cells in mitosis by exposure to nocodazole. Borealin was analyzed by Western blotting at various time points after release from the nocodazole block. Cells were harvested up to 8 hours post release to determine the mobility shift of Borealin and the level of Cyclin B1 as a control for mitotic exit. At 1-hour post release, Borealin is mostly in the slower migrating phosphorylated form (Fig. 4B). At 1-hour post release we consistently observe a ~30% increase in the total level of Borealin protein compared to cells blocked with nocodazole (Fig. 4B). Dephosphorylation of Borealin is just visible at 2 hours and by 8 hours, cells show an abundant, faster migrating, dephosphorylated form of Borealin. Cyclin B1 levels decreased by 8 hours indicating that the cells have exited mitosis (Fig. 4B). Thus, the dephosphorylation of Borealin correlates with Cyclin B1 degradation.
Levels of ectopic Borealin in mitosis
We observed a higher level of Flag-Borealin protein when cells were arrested in mitosis (Fig. 1A). In addition, the mutant of Borealin in which S165 was changed to alanine also accumulated to higher levels when cells were blocked in mitosis compared to when they were growing asynchronously (Fig. 1A). The Flag-Borealin used is under the transcriptional control of the cytomegalovirus (CMV) promoter. CMV has been reported to be active throughout the cell cycle . To confirm this in our cells we transiently transfected them with green fluorescent protein (GFP) under the control of the CMV promoter. Similar levels of GFP protein were observed in interphase and mitotic cells suggesting that the overexpression of Borealin is not due to changes in transcription (Fig. 1E).
Mitotic phosphorylation of Borealin is not dependent on Aurora B Kinase
To determine the effect of Aurora B Kinase on the phosphorylation of Borealin, we pretreated WT-8 cells with 2 μM ZM447439 for 1 hour and then added nocodazole for 16 hours to block them in mitosis. ZM447439 was left in the medium during the nocodazole treatment to ensure that cells entered mitosis with low levels of Aurora kinase activity. Under these conditions, Borealin migrated as a doublet similar to the cells blocked in mitosis with nocodazole without adding ZM447439 (Fig. 5B). Also, pretreatment of WT-8 cells with a higher dose of ZM447439 (10 μM) or VE465 (100 nM), another Aurora Kinase inhibitor  followed by nocodazole did not block the mitotic mobility shift of Borealin (Fig. 5C). This suggests that Aurora B is not required to generate the phosphorylated mitotic form of Borealin.
Localization of Borealin in cells that fail to divide
Phosphorylation of Borealin during interphase
Evidence that the phosphorylation of Borealin is regulated by a labile serine/threonine phosphatase
Phosphorylated Borealin interacts with INCENP during mitosis
The chromosomal passenger complex consisting of INCENP, Survivin, Borealin and Aurora B plays important roles in chromosome segregation at mitosis and cell division once mitosis is complete . The complex shows a dynamic pattern of localization, being found at centromeres during metaphase and being deposited at the spindle midzone during anaphase after sister chromatid separation. There is evidence that targeting to the centromere is in part mediated by Borealin which can bind to DNA . Targeting to the microtubules at the spindle midzone may be mediated by INCENP which has affinity for tubulin . How the localization of the complex is regulated is not completely understood, although the kinesin MKlp-2 is required for re-localization of INCENP and Aurora B from centromeres to the spindle midzone . borealin mRNA is cell cycle regulated with maximal expression during G2 and mitosis [18, 34]. Also, endogenous Borealin protein levels are increased in cells blocked in mitosis using nocodazole [18, 34]. We also observed that ectopic Flag-tagged Borealin driven by a constitute CMV promoter was more abundant in nocodazole-blocked cells (Jacob and Taylor, unpublished observations). Since similar levels of GFP protein are expressed under the control of the CMV promoter in asynchronous and mitotic cells, we predict that the level of Borealin protein in mitosis is under post-transcriptional control. Serine 165 can be phosphorylated in vitro by Aurora B Kinase , and threonine 106 conforms to a single consensus CDK1 site (S/TP-X-K/R) in Borealin. Mutation of either site did not disrupt the upregulation of ectopic Borealin in mitosis (Fig. 1A and unpublished data), or alter the ability of the Flag-tagged protein to localize to centromeres and the spindle midzone (Fig. 2 and unpublished data). Interestingly, extensive electrophoresis allowed us to detect a phosphorylated form of Borealin that is most abundant during mitosis. This slower migrating, phosphorylated form of Borealin was evident for endogenous Borealin and for exogenous, Flag-tagged Borealin in mitotic cells. In addition, this mitotic form of Borealin was observed when serine 165 or threonine 106 were mutated to alanine (Fig. 1A and unpublished data), and also when Aurora B kinase was inhibited by exposing cells to ZM447439 or VE465. Therefore, Borealin is phosphorylated during mitosis in vivo by an unknown kinase, at a site or sites other than or in addition to S165 or T106. It is possible that phosphorylation at T106 or S165 occurs in vivo but does not lead to a mobility shift and our results do not exclude this possibility.
We observed that Borealin is dephosphorylated as cells exit mitosis. Interestingly, treating asynchronous or S phase cells with cyclohexamide induced a mobility shift of Borealin as a result of phosphorylation. Our model to explain the effects of cyclohexamide is that the Borealin kinase is active throughout the cell cycle, but is counteracted by a labile phosphatase that is active during interphase. Inactivation of the phosphatase during mitosis would allow accumulation of the mitotic form of Borealin. Consistent with this hypothesis, we observed an increase in the slower migrating, phosphorylated form of Borealin when asynchronous or S phase cells were exposed to NaF, a broad-spectrum phosphatase inhibitor. The shifted form of Borealin induced by cyclohexamide or NaF shows a similar mobility as the form that accumulates during mitosis. Our working hypothesis is that the same phosphorylation events are responsible for these shifted forms. The fact that neither okadaic acid nor cyclosporine A induced the phosphorylation of Borealin during interphase indicates that dephosphorylation is not accomplished by the phosphatases PP1, PP2A, PP2B, PP4 or PP5. There are other more complicated models to explain the effects of cyclohexamide and NaF on Borealin phosphorylation and further study will be required to understand the molecular basis of its cell cycle-dependent phosphorylation.
The mechanisms that control the function of Borealin and the chromosomal passenger complex are not completely understood. For example, as found for INCENP and Aurora B  we found that the movement of Borealin from centromeres to the spindle midzone was independent of a functional actomyosin ring. Borealin was found at the telophase disk, a remnant of the spindle midzone that persists hours after cleavage has been aborted . In some cells we could observe decondensed chromatin indicating that the binucleated daughter nuclei had entered G1, with Borealin still attached to the remnants of the spindle midzone (for example see Fig. 6C). The mechanism responsible for this persistent accumulation is not clear. The release of Borealin from the spindle midzone may require additional mechanisms apart from dephosphorylation of Borealin. One possibility is that cell division provides a trigger to remove Borealin (and likely the entire CPC) from the midzone microtubules.
To begin to analyze the functional significance of Borealin phosphorylation, we studied its interaction with another CPC protein, INCENP. Abundant, phosphorylated Borealin was detected in INCENP immunoprecipitates from mitotic cells showing that INCENP interacts with phosphorylated Borealin, the form that predominates during mitosis. Analysis of INCENP immunoprecipitates from asynchronous cells was more informative. Although Borealin was mostly in the dephosphorylated form in the total lysate, INCENP immunoprecipitated equal amounts of both migrating forms of Borealin. This shows that the interphase, fast migrating form of Borealin can form a complex with INCENP, however, preference is given to the phosphorylated form. One interpretation is that the phosphorylation of Borealin during mitosis stabilizes its association with the CPC. This may occur by stabilizing its interaction with Survivin, INCENP, itself, DNA or via a combination of those interactions. Further analysis of the modification of Borealin should help to illuminate how the CPC is assembled.
Our results indicate that a phosphorylated form of Borealin exists in mitotic cells. Generation of this mitotic phosphorylated form of Borealin does not require Aurora B Kinase activity or the residues S165 or T106 of Borealin. Both the interphase form and the mitotic form of Borealin can form a complex with INCENP, however there is a preference for the mitotic form. A phosphorylated form of Borealin can also be induced in interphase cells by treatment with either cyclohexamide or NaF. Borealin travels to the spindle midzone when actin/myosin-mediated contraction of the cleavage furrow is inhibited, and remains attached to the remnants of the spindle in cells that fail to divide. Borealin is dephosphorylated when cells exit mitosis whether or not they are able to form a functional cleavage furrow.
Cell culture and drug treatment
Cells were maintained in Dulbecco's minimal essential medium (Gibco) with 10% fetal bovine serum and penicillin/streptomycin and in a humidified atmosphere of 10% CO2 at 37°C. Chemicals were obtained from Sigma-Aldrich unless otherwise noted. Nocodazole was used at a concentration of 200 ng/ml, LLnL at 50 μM, blebbistatin at 100 μM, hydroxyurea at 2 mM, Cyclohexamide at 25 μg/ml, okadaic acid at 50 nM and cyclosporine A at 100 nM. In experiments where nocodazole was used to synchronize cells, a lower concentration (60 ng/ml for 16 hours) was used to aid in its removal by multiple washes with phosphate buffered saline (PBS). In order to collect mitotic cells in the absence of nocodazole, WT-8 cells stably expressing ectopic Flag-Borealin were plated 1 day before collection. Mitotic cells were collected by vigorous agitation of the plate. Aurora B Kinase inhibitors ZM447439 and VE465 were obtained from Astra Zeneca and Vertex Pharmaceuticals Ltd., respectively.
Construction of T106A and S165A mutants of Borealin
A cDNA encoding Flag-tagged human Borealin protein was previously created in our lab. This cDNA was subjected to polymerase chain reaction (PCR)-mediated site-directed mutagenesis to create T106A and S165A mutants. For the T106A mutant, the following sets of primers were used. To amplify the first 335-bp fragment, the forward primer (5' AGCAGGCTCCGCGGCCGC 3') and the reverse primer R1 containing the mutation (5' AGATTTCAGGGGAGCCTGAATAG 3') were used. To amplify the second 557-bp fragment, the forward primer F2 containing the mutation (5' CTATTCAGGCTCCCCTGAAATC 3') and the reverse primer R2 (5' TGGGTCGGCGCGCCCACC 3') were used. In the third PCR reaction, the PCR products of the first two reactions were used as templates with F1 and R2 primers to construct the final 892-bp mutated PCR product. The 892-bp fragment between the unique Not1 and Asc1 sites in the wild type cDNA was then replaced by the corresponding PCR product containing the mutation to make the T106A construct.
In the S165A mutant, both S164 and S165 were mutated to alanine. The F1 and R2 primers used for the construction for T106A construct were used for the S165A construct but the following R1 and F2 primers containing the mutation were used: R1 (5' TAGCACGAGCAGCCCTTTTCC 3') and F2 (5' GGAAAAGGGCTGCTCGTGCTA 3'). Competent E. coli were then transformed with the ligation products. After selection on ampicillin plates, plasmids encoding T106A and S165A mutated versions of borealin were purified from bacteria and used for transfection. All mutations were confirmed by DNA sequencing.
Transfections and selection of stable cell lines
For transient transfections, Hela were transfected using either Lipofectamine 2000 (Invitrogen) or Fugene 6 (Roche). For stable cell lines, Hela cells were transfected with a construct encoding Flag-tagged wild type Borealin using Lipofectamine 2000. Selection was initiated by adding 400 μg/ml G418, 48 hours after transfection. Stably transfected cells were obtained two weeks after transfection.
Cells were lysed in buffer containing 50 mM Tris (pH 8.0), 150 mM NaCl, 1.0% NP-40, 1 mM phenyl methane sulfonyl fluoride (PMSF), 1 mM dithiothreitol (DTT), protease inhibitors (1 μg/ml aprotinin, 2 μg/ml leupeptin, 1 μg/ml pepstatin) and phosphatase inhibitors (1 mM sodium fluoride and 1 mM sodium vanadate) on ice and cell lysates were resolved by sodium dodecyl sulfate-polyacrylamide gel electrophoresis (SDS-PAGE)(12.5% acrylamide at a ratio of 37.5:1 acrylamide: bisacrylamide). In some experiments, in order to better separate phosphorylated and unphosphorylated forms of Borealin, lysates were separated using either 12.6% or 15% acrylamide with a ratio of 29.2:0.8 acrylamide: bisacrylamide . The proteins were subsequently transferred to polyvinylidenefluoride membranes (Millipore, Bedford, MA). Western blots were blocked in PBS containing 0.05%(v/v) Tween and 5%(w/v) non-fat dry milk and antibodies for Western blotting were diluted in the same buffer. Antibodies to Flag-tag were directly conjugated to HRP (Bethyl laboratories) and were used at a dilution of 1:2000. Antibodies to β-actin (NeoMarkers) were diluted to 1:5000, antibodies to GFP (Santa Cruz Biotechnologies) were diluted to 1:500 and antibodies to Cyclin B1 (NeoMarkers) were diluted to 1:300. Rabbit anti-Borealin antibody was used at a dilution of 1:10,000 and anti-INCENP (Upstate) antibody was used at a concentration of 0.5 μg/ml. Goat anti-mouse and goat anti-rabbit secondary antibodies conjugated to HRP (Santa Cruz Biotechnologies) were diluted to 1:2000 and 1:3000, respectively and detected by enhanced chemiluminescence (Dupont, Wilmington, DE)(Clifford, Beljin, Stark & Taylor, 2003).
Hela cells transiently transfected with wild-type or T106A Flag-Borealin were left untreated or treated with nocodazole for 14 hrs. Cells were lysed with RIPA buffer (10 mM TRIS pH 7.4, 150 mM NaCl, 1% NP-40, 1% sodium deoxycholate, 0.1% SDS) containing aprotinin, leupeptin, pepstatin A, PMSF and DTT as described above, however sodium fluoride and sodium vanadate were omitted. Cell lysates were left untreated or treated with 1.5 units of calf intestinal phosphatase (Promega) in the reaction buffer provided for 1 or 4 hrs at 37°C. For samples where the added phosphatase was inhibited with phosphatase inhibitors, we also added NaF and NaVO3, both at a concentration of 1 mM. Reactions were stopped by adding a Laemlli loading buffer stock to attain the following final buffer composition (2% [w/v] SDS, 50 mM Tris, pH 6.8, 10% [v/v] glycerol and 100 mM DTT).
Asynchronously growing or mitotic WT-8 cells (blocked in mitosis using 60 ng/ml nocodazole for 16 hours) were lysed as previously described with some modifications . Cells were incubated in lysis buffer containing 50 mM Tris-HCl (pH 8.0), 400 mM NaCl, 0.5% NP-40, 0.1% deoxycholate, 1 mM PMSF, 1 μg/ml protease inhibitors (aprotinin, leupeptin and pepstatin), 1 mM phosphatase inhibitors (sodium fluoride and sodium vanadate), 30 μg/ml RNase A and 80 U/ml DNase1 for 20 minutes on ice. 4 μg/ml anti-INCENP antibodies and 4 μg/ml anti-p53 antibodies (negative control)(Santa Cruz Biotechnology) coupled to protein-G magnetic beads were added to the cleared lysate and rocked for 5 hours at 4°C. The beads were washed twice with the lysis buffer (without RNase A and DNase1) and once with wash buffer containing 10 mM Tris-HCl (pH 7.4) and 150 mM NaCl. The washed beads were analyzed by SDS-polyacylamide gel electrophoresis and subsequent Western blotting.
Immunofluorescence and confocal microscopy
For immunofluorescence microscopy, Hela cells grown on coverslips were transiently transfected with constructs encoding Flag-tagged wild type, T106A and S165A mutated versions of borealin. 48 hours after transfection, cells were fixed with 100% methanol followed by 100% acetone and blocked with PBS containing 0.1% bovine serum albumin (BSA) overnight at 4°C. Blocked cells were incubated with rabbit anti-Flag (Sigma) and mouse anti-α tubulin (Sigma) primary antibodies for one hour at room temperature. Cells were then incubated with Alexafluor conjugated goat anti-rabbit (Molecular Probes) and fluorescein isothiocyanate-conjugated goat anti-mouse (Sigma) secondary antibodies for 45 minutes at room temperature. Nuclei were stained with 4', 6-Diamidino-2-phenylindole and coverslips were mounted using Vectashield (Vector Laboratories). Standard fluorescent images were captured using a spot camera connected to an Axiophot fluorescence microscope. To obtain confocal images, HEK293 cells stably expressing Borealin-GFP were fixed with 2% formaldehyde in PBS. Cells were permeabilized with 150 mM NaCl, 10 mM Tris (pH 7.7), 0.1% Triton-X-100 (v/v), and 0.1% BSA (w/v). Microtubules were detected with a monoclonal antibody to α-tubulin followed by goat-anti-mouse Alexafluor 568 (Molecular Probes). Borealin was detected by GFP fluorescence and confocal images were captured with an inverted 1 × 70 confocal microscope with Fluoview software (Olympus-Fluoview).
Production of rabbit anti-Borealin antiserum
To raise polyclonal antisera, a fusion containing glutathione-S-transferase (GST) followed by Borealin at the carboxyl-terminus was created. Full length borealin was amplified by PCR using a forward primer containing a Bcl1 site (5-GCGGTGATCACTCCTAGGAAGGGCAGTAGTC-3') and a reverse primer with an EcoR1 site (5'-GAATTCTCATTTGTGGGTCCGTATGCTGCT-3'). The PCR product was digested and ligated into pGEX-3X digested with BamH1 and EcoR1, clones were tested by restriction mapping and confirmed by DNA sequencing. The gst-borealin was transformed into Rosetta strain of E. coli (Novagen), which was grown at 37C for 16 h and induced with IPTG for 3 h. Under these conditions, GST-Borealin enters inclusion bodies. To isolate the inclusion bodies, bacterial pellets were resuspended in PBS containing aprotinin, leupeptin, pepstatin A, PMSF and 0.1% lysozyme (w/v). Bacteria were disrupted by sonication and insoluble material collected by centrifugation. The pellet was resuspended in wash buffer (50 mM Tris pH 8.0, 2% (v/v) Triton-X-100, 10 mM EDTA) containing 0.5 M Urea, and insoluble material collected by centrifugation. The pellet was resuspended in wash buffer containing 1 M Urea, and again subject to centrifugation. The pellet was resuspended in wash buffer with 2 M Urea, and insoluble material collected by centrifugation. The pellet, representing washed inclusion bodies was resuspended in PBS and sent to Proteintech Group Inc. for solubilization, injection into rabbits and production of custom antiserum.
Chromosomal Passenger Complex
INner CENtromere Protein
Phosphate Buffered Saline
sodium dodecyl sulfate – polyacrylamide gel electrophoresis
Green Fluorescent Protein
Phenyl Methane Sulfonyl Fluoride
Bovine Serum Albumin
Polymerase Chain Reaction.
We gratefully acknowledge AstraZeneca and Vertex for Aurora kinase inhibitors. We are also grateful to Dr. J. Plenefisch for help with microscopic imaging, Dr. D. Chadee for advice on electrophoresis, and Darko Todorov for help with preparing recombinant Borealin. We are also grateful to Cara Jacob for generating BOR-GFP and the stable 293 clone. This work was supported by a grant from the NIHGMS (R15GM073758-01) to WRT.
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